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  "Title": "Reconstruct Paleoclimate and Paleoecology with Leaf Physiognomy",
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  "Description": "Use leaf physiognomic methods to reconstruct mean annual\ntemperature (MAT), mean annual precipitation (MAP), and leaf\ndry mass per area (Ma), along with other useful quantitative\nleaf traits. Methods in this package described in Lowe et al.\n(2024).",
  "License": "GPL (>= 3)",
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